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Solas comes as a stand alone package for the statistical language R, devoted to the analysis of RNA-Seq data.
Download and Installation
The latest version of the package can be downloaded here: Solas Package (version 0.2.1)
- type on the commad line: R CMD INSTALL yourPath/Solas/ to install the package to your local R version
- open R and type library(Solas) to load the package
- as a first sanity check you can compile the tutorial in R:
Sweave("yourPath/Solas/doc/Overview.Rnw") , this creates the Overview.tex file
in the folder
- you can now run pdflatex yourPath/Solas/doc/Overview.tex , which creates the
The tutorial can alternatively be downloaded here .
Additional documentation of the functions of Solas can be found in the manual supplied with the package.